StringDiff (SnpEff 5.4 API)

java.lang.Object

org.snpeff.align.StringDiff

public class StringDiff extends Object

Constructor Summary

Constructors

Constructor

Description

StringDiff(String s1, String s2)

StringDiff(String s1, String name1, String s2, String name2)
Method Summary

Modifier and Type

Method

Description

int

count()

Count number of differences between strings

String

diffString()

Create a string that shows the difference between two strings

double

error()

Error ratio (number of mismatches divided by string length

String

toString()

Methods inherited from class Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details
- StringDiff
  
  public StringDiff(String s1, String s2)
- StringDiff
  
  public StringDiff(String s1, String name1, String s2, String name2)
Method Details
- count
  
  public int count()
  
  Count number of differences between strings
- diffString
  
  public String diffString()
  
  Create a string that shows the difference between two strings
- error
  
  public double error()
  
  Error ratio (number of mismatches divided by string length
- toString
  
  public String toString()
  
  Overrides:
  
  toString in class Object