org.snpeff.outputFormatter.BedAnnotationOutputFormatter

public class BedAnnotationOutputFormatter extends BedOutputFormatter

Formats: Show all annotations that intersect the BED input file. WARNING: In this format, the output are annotations (instead of input intervals)

Constructor Details
- BedAnnotationOutputFormatter
  
  public BedAnnotationOutputFormatter()
Method Details
- toString
  
  public String toString()
  
  Show all effects
  
  Overrides:
  
  toString in class BedOutputFormatter
- toStringHeader
  
  public String toStringHeader()
  
  Show header
  
  Overrides:
  
  toStringHeader in class BedOutputFormatter

Class BedAnnotationOutputFormatter

Constructor Summary